Hybrid Architectures at the Nanoscale: Constructing Materials through Electrostatic Interactions

dc.contributorAalto-yliopistofi
dc.contributorAalto Universityen
dc.contributor.advisorAnaya-Plaza Eduardo, Dr., Aalto University, Finland
dc.contributor.authorShaukat, Ahmed
dc.contributor.departmentBiotuotteiden ja biotekniikan laitosfi
dc.contributor.departmentDepartment of Bioproducts and Biosystemsen
dc.contributor.labBiohybdrid Materialsen
dc.contributor.schoolKemian tekniikan korkeakoulufi
dc.contributor.schoolSchool of Chemical Technologyen
dc.contributor.supervisorKostiainen, Mauri A., Prof., Aalto University, Department of Bioproducts and Biosystems, Finland
dc.date.accessioned2023-10-27T09:00:12Z
dc.date.available2023-10-27T09:00:12Z
dc.date.defence2023-11-10
dc.date.issued2023
dc.description.abstractNature's intricate biomolecular assemblies inspire crafting nano- and microscale functional materials. Comprising nucleotides, amino acids, and saccharides, these structures orchestrate cellular functions with precision. Replicating this complexity artificially is challenging, but nanoscale techniques, especially nature-mimicking self-assembly, offer atomic-level precision through non-covalent interactions. Electrostatic self-assembly stands out for versatility, enabling diverse functional materials. This reversible process facilitates the exact arrangement of charged components. Moreover, the utilization of biomolecule-based materials as building blocks in nanomaterials presents a promising avenue, leading to the development of highly biocompatible functional systems. This convergence of principles is exemplified in this thesis, which demonstrates how functional and self-assembling biohybrid materials can be constructed precisely by synergistically combining DNA origami and protein cages with molecular glues. Thus, Publication I opens the study by designing hybrid bundles, uniting cationic dyes like zinc phthalocyanine with negatively charged DNA origami. This synergy enhances optical properties and stability, effectively showcasing the potential of electrostatic self-assembly in customizing material traits. Publication II extends the study by introducing Janus-type phthalocyanines with two different DNA origami structures, resulting in optically active biohybrids resistant to aggregation. This underscores the role of ionic strength in self-assembly and disassembly processes, deepening the insights into biohybrid material formation. Publication III delves into crystalline assemblies, harnessing electrostatic self-assembly of pillar[5]arene with apoferritin, unveiling promising prospects for water remediation. This endeavor highlights the versatile capabilities of biomolecular self-assembly in addressing pressing environmental challenges. Publication IV demonstrates the formation of protein-protein co-crystals involving cationic fluorescent protein and negatively charged apoferritin, thereby showcasing robust optical properties with potential applications in biological light-emitting diodes. In summation, the collective body of work presented in this thesis underscores the potential of electrostatic self-assembly in crafting intricate biohybrid materials. These findings provide understanding of electrostatic self-assembly, establishing a path for preparing cutting-edge nanomaterials with applications in nanomedicine, optoelectronics, and water treatment. This research effectively links intricate biomolecular assemblies and synthetic constructs, potentially finding utility in novel solutions across multifarious sectors.en
dc.format.extent88 + app. 96
dc.format.mimetypeapplication/pdfen
dc.identifier.isbn978-952-64-1512-3 (electronic)
dc.identifier.isbn978-952-64-1511-6 (printed)
dc.identifier.issn1799-4942 (electronic)
dc.identifier.issn1799-4934 (printed)
dc.identifier.issn1799-4934 (ISSN-L)
dc.identifier.urihttps://aaltodoc.aalto.fi/handle/123456789/124298
dc.identifier.urnURN:ISBN:978-952-64-1512-3
dc.language.isoenen
dc.opnBeck, Tobias, Prof., University of Hamburg, Germany
dc.publisherAalto Universityen
dc.publisherAalto-yliopistofi
dc.relation.haspart[Publication 1]: Ahmed Shaukat, Eduardo Anaya-Plaza, Sofia Julin, Veikko Linko, Tomas Torres, Andrés de la Escosura and Mauri A. Kostiainen. Phthalocyanine–DNA Origami Complexes with Enhanced Stability and Optical Properties. Chemical Communications, 2020, 56, 7341–7344. Full text in Acris/Aaltodoc: http://urn.fi/URN:NBN:fi:aalto-202008064483. DOI: 10.1039/D0CC01916J
dc.relation.haspart[Publication 2]: Asma Rahali, Ahmed Shaukat, Verónica Almeida-Marrero, Bassem Jamoussi, Andrés de la Escosura, Tomás Torres, Mauri A. Kostiainen, Eduardo Anaya-Plaza. A Janus-Type Phthalocyanine for The Assembly of Photoactive DNA Origami Coatings. Bioconjugate Chemistry, 2021, 6, 1123–1129. Full text in Acris/Aaltodoc: http://urn.fi/URN:NBN:fi:aalto-202108048141. DOI: 10.1021/acs.bioconjchem.1c00176
dc.relation.haspart[Publication 3]: Ahmed Shaukat, Eduardo Anaya-Plaza, Ngong Kodiah Beyeh, Mauri A. Kostiainen. Simultaneous Organic and Inorganic Host‐Guest Chemistry within Pillararene‐Protein Cage Frameworks. Chemistry–A European Journal. 2022, 19, e202104341. Full text in Acris/Aaltodoc: http://urn.fi/URN:NBN:fi:aalto-202202161933. DOI: 10.1002/chem.202104341
dc.relation.haspart[Publication 4]: Marta Patrian, Ahmed Shaukat, Mattia Nieddu, Jesús A. Banda-Vázquez, Jaakko V. I. Timonen, JP Fuenzalida-Werner, Eduardo Anaya‐Plaza, Mauri A. Kostiainen, and Rubén D. Costa. Supercharged Fluorescent Protein-Apoferritin Cocrystals for Lighting Applications. 2023, accepted in ACS Nano
dc.relation.ispartofseriesAalto University publication series DOCTORAL THESESen
dc.relation.ispartofseries186/2023
dc.revEdwardson,Thomas G. W., Dr., ETH Zürich, Switzerland
dc.revSzuchmacher Blum, Amy, Prof., McGill University, Canada
dc.subject.keywordprotein cagesen
dc.subject.keywordDNA origamien
dc.subject.keywordelectrostatic interactionen
dc.subject.keywordself-assemblyen
dc.subject.otherBiotechnologyen
dc.titleHybrid Architectures at the Nanoscale: Constructing Materials through Electrostatic Interactionsen
dc.typeG5 Artikkeliväitöskirjafi
dc.type.dcmitypetexten
dc.type.ontasotDoctoral dissertation (article-based)en
dc.type.ontasotVäitöskirja (artikkeli)fi
local.aalto.acrisexportstatuschecked 2023-11-10_1501
local.aalto.archiveyes
local.aalto.formfolder2023_10_27_klo_11_44
local.aalto.infraBioeconomy Infrastructure
local.aalto.infraOtaNano
local.aalto.infraOtaNano - Nanomicroscopy Center
local.aalto.infraRaw MatTERS Infrastructure (RAMI)
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