Task-driven optimization of MRI sampling and IVIM parameter estimation

dc.contributorAalto-yliopistofi
dc.contributorAalto Universityen
dc.contributor.advisorLi, Haibo
dc.contributor.advisorYang, Zhikai
dc.contributor.authorMa, Yangle
dc.contributor.schoolSähkötekniikan korkeakoulufi
dc.contributor.schoolSchool of Electrical Engineeringen
dc.contributor.supervisorZhou, Quan
dc.date.accessioned2025-12-15T18:04:10Z
dc.date.available2025-12-15T18:04:10Z
dc.date.issued2025-10-31
dc.description.abstractMagnetic Resonance Imaging (MRI) plays a central role in non-invasive, high-resolution characterization of tissue microstructure. Among its modalities, diffusion-weighted imaging (DWI) supports estimation of intravoxel incoherent motion (IVIM) parameters, which capture both diffusion and perfusion processes. However, conventional IVIM pipelines rely on fixed acquisition patterns and stage-wise training, often yielding suboptimal accuracy under undersampling. In this work, we propose a task-driven, end-to-end framework that couples learnable k-space sampling (Multi-LOUPE), image reconstruction, and tissue-specific IVIM parameter estimation. The pipeline integrates a tissue-weighted task loss and a dynamic multi-phase training strategy that progressively shifts focus from reconstruction fidelity to parameter accuracy, enabling gradient flow from IVIM supervision back to the sampling masks. Experiments on the large-scale VICTRE breast phantom dataset demonstrate that our framework achieves balanced tissue-wise accuracy across tumor, vessel, and fat regions, matching or surpassing pattern-specific models while eliminating the need for retraining per sampling strategy. Additional analyses further confirm that the learned sampling masks capture complementary frequency information, explaining their robustness under undersampling. Overall, this study shows that optimizing the entire flow—from what to measure in k-space to how to estimate quantitative parameters—outperforms stage-wise designs, offering a more generalizable and efficient pathway for accelerated quantitative MRI.en
dc.format.extent41
dc.format.mimetypeapplication/pdfen
dc.identifier.urihttps://aaltodoc.aalto.fi/handle/123456789/141050
dc.identifier.urnURN:NBN:fi:aalto-202512159165
dc.language.isoenen
dc.locationP1fi
dc.programmeMaster's Programme in ICT Innovationen
dc.programmeMaster's Programme in ICT Innovationfi
dc.programmeMaster's Programme in ICT Innovationsv
dc.programme.majorAutonomous Systemsen
dc.subject.keywordmedical imagingen
dc.subject.keyworddiffusion MRIen
dc.subject.keywordIVIM parameter estimationen
dc.subject.keywordend-to-end pipelineen
dc.subject.keywordlearnable samplingen
dc.subject.keywordmulti-LOUPEen
dc.subject.keywordtissue-aware regressionen
dc.titleTask-driven optimization of MRI sampling and IVIM parameter estimationen
dc.typeG2 Pro gradu, diplomityöfi
dc.type.ontasotMaster's thesisen
dc.type.ontasotDiplomityöfi
local.aalto.electroniconlyyes
local.aalto.openaccessno

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