Serum APOC1 levels are decreased in young autoantibody positive children who rapidly progress to type 1 diabetes

dc.contributorAalto-yliopistofi
dc.contributorAalto Universityen
dc.contributor.authorHirvonen, M. Karoliinaen_US
dc.contributor.authorLietzén, Niinaen_US
dc.contributor.authorMoulder, Roberten_US
dc.contributor.authorBhosale, Santosh D.en_US
dc.contributor.authorKoskenniemi, Jaakkoen_US
dc.contributor.authorVähä-Mäkilä, Marien_US
dc.contributor.authorNurmio, Mirjaen_US
dc.contributor.authorOrešič, Matejen_US
dc.contributor.authorIlonen, Jormaen_US
dc.contributor.authorToppari, Jormaen_US
dc.contributor.authorVeijola, Riittaen_US
dc.contributor.authorHyöty, Heikkien_US
dc.contributor.authorLähdesmäki, Harrien_US
dc.contributor.authorKnip, Mikaelen_US
dc.contributor.authorCheng, Luen_US
dc.contributor.authorLahesmaa, Riittaen_US
dc.contributor.departmentDepartment of Computer Scienceen
dc.contributor.groupauthorComputer Science Professorsen
dc.contributor.groupauthorComputer Science - Computational Life Sciences (CSLife) - Research areaen
dc.contributor.groupauthorComputer Science - Artificial Intelligence and Machine Learning (AIML) - Research areaen
dc.contributor.groupauthorHelsinki Institute for Information Technology (HIIT)en
dc.contributor.groupauthorProfessorship Lähdesmäki Harrien
dc.contributor.groupauthorProfessorship Vehtari Akien
dc.contributor.organizationUniversity of Turkuen_US
dc.contributor.organizationUniversity of Ouluen_US
dc.contributor.organizationTampere Universityen_US
dc.contributor.organizationUniversity of Helsinkien_US
dc.date.accessioned2023-10-04T06:10:20Z
dc.date.available2023-10-04T06:10:20Z
dc.date.issued2023-12en_US
dc.descriptionFunding Information: The authors are grateful to the DIPP families for their participation and the clinical personnel for excellent collaboration, working with the families and obtaining the samples and clinical data for the study. We also thank the staff of the DIPP Immunogenetics laboratory at University of Turku and the DIPP autoantibody laboratory at University of Oulu. The mass spectrometry analyses presented in this work were performed at the Proteomics Core Facility of the Turku Bioscience Centre that belongs to Biocenter Finland infrastructure network. We thank Pekka Haapaniemi (Proteomics Facility, Turku Bioscience Centre, Finland) for his invaluable help in sample preparation, and also other facility members for the excellent technical support. L. C. and H. L. acknowledges the computational resources provided by the Aalto Science-IT project and CSC—IT Center for Science, Finland. Figure was created with Biorender.com. Funding Information: The authors are grateful to the DIPP families for their participation and the clinical personnel for excellent collaboration, working with the families and obtaining the samples and clinical data for the study. We also thank the staff of the DIPP Immunogenetics laboratory at University of Turku and the DIPP autoantibody laboratory at University of Oulu. The mass spectrometry analyses presented in this work were performed at the Proteomics Core Facility of the Turku Bioscience Centre that belongs to Biocenter Finland infrastructure network. We thank Pekka Haapaniemi (Proteomics Facility, Turku Bioscience Centre, Finland) for his invaluable help in sample preparation, and also other facility members for the excellent technical support. L. C. and H. L. acknowledges the computational resources provided by the Aalto Science-IT project and CSC—IT Center for Science, Finland. Figure 1 was created with Biorender.com. Publisher Copyright: © 2023, Springer Nature Limited.
dc.description.abstractBetter understanding of the early events in the development of type 1 diabetes is needed to improve prediction and monitoring of the disease progression during the substantially heterogeneous presymptomatic period of the beta cell damaging process. To address this concern, we used mass spectrometry-based proteomics to analyse longitudinal pre-onset plasma sample series from children positive for multiple islet autoantibodies who had rapidly progressed to type 1 diabetes before 4 years of age (n = 10) and compared these with similar measurements from matched children who were either positive for a single autoantibody (n = 10) or autoantibody negative (n = 10). Following statistical analysis of the longitudinal data, targeted serum proteomics was used to verify 11 proteins putatively associated with the disease development in a similar yet independent and larger cohort of children who progressed to the disease within 5 years of age (n = 31) and matched autoantibody negative children (n = 31). These data reiterated extensive age-related trends for protein levels in young children. Further, these analyses demonstrated that the serum levels of two peptides unique for apolipoprotein C1 (APOC1) were decreased after the appearance of the first islet autoantibody and remained relatively less abundant in children who progressed to type 1 diabetes, in comparison to autoantibody negative children.en
dc.description.versionPeer revieweden
dc.format.extent11
dc.format.mimetypeapplication/pdfen_US
dc.identifier.citationHirvonen, M K, Lietzén, N, Moulder, R, Bhosale, S D, Koskenniemi, J, Vähä-Mäkilä, M, Nurmio, M, Orešič, M, Ilonen, J, Toppari, J, Veijola, R, Hyöty, H, Lähdesmäki, H, Knip, M, Cheng, L & Lahesmaa, R 2023, ' Serum APOC1 levels are decreased in young autoantibody positive children who rapidly progress to type 1 diabetes ', Scientific Reports, vol. 13, no. 1, 15941, pp. 1-11 . https://doi.org/10.1038/s41598-023-43039-4en
dc.identifier.doi10.1038/s41598-023-43039-4en_US
dc.identifier.issn2045-2322
dc.identifier.otherPURE UUID: 906544fc-2ae2-4582-89b5-88f25e3584feen_US
dc.identifier.otherPURE ITEMURL: https://research.aalto.fi/en/publications/906544fc-2ae2-4582-89b5-88f25e3584feen_US
dc.identifier.otherPURE LINK: http://www.scopus.com/inward/record.url?scp=85171842365&partnerID=8YFLogxK
dc.identifier.otherPURE FILEURL: https://research.aalto.fi/files/123146081/Serum_APOC1_levels_are_decreased_in_young_autoantibody_positive_children_who_rapidly_progress_to_type_1_diabetes.pdfen_US
dc.identifier.urihttps://aaltodoc.aalto.fi/handle/123456789/123821
dc.identifier.urnURN:NBN:fi:aalto-202310046177
dc.language.isoenen
dc.publisherNature Publishing Group
dc.relation.ispartofseriesScientific Reportsen
dc.relation.ispartofseriesVolume 13, issue 1, pp. 1-11en
dc.rightsopenAccessen
dc.titleSerum APOC1 levels are decreased in young autoantibody positive children who rapidly progress to type 1 diabetesen
dc.typeA1 Alkuperäisartikkeli tieteellisessä aikakauslehdessäfi
dc.type.versionpublishedVersion

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