Dynamical scaling exponents for polymer translocation through a nanopore

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© 2008 American Physical Society (APS). http://www.aps.org

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Volume Title

School of Science | A1 Alkuperäisartikkeli tieteellisessä aikakauslehdessä

Date

2008

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Mcode

Degree programme

Language

en

Pages

050901/1-4

Series

Physical Review E, Volume 78, Issue 5

Abstract

We determine the scaling exponents of polymer translocation (PT) through a nanopore by extensive computer simulations of various microscopic models for chain lengths extending up to N=800 in some cases. We focus on the scaling of the average PT time τ∼Nα and the mean-square change of the PT coordinate, ⟨s2(t)⟩∼tβ. We find α=1+2ν and β=2∕α for unbiased PT in two dimensions (2D) and three dimensions (3D). The relation αβ=2 holds for driven PT in 2D, with a crossover from α≈2ν for short chains to α≈1+ν for long chains. This crossover is, however, absent in 3D where α=1.42±0.01 and αβ≈2.2 for N≈40−800.

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Keywords

polymer translocation, translocation time, scaling exponent

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Citation

Luo, Kaifu & Ollila, Santtu T. T. & Huopaniemi, Ilkka & Ala-Nissilä, Tapio & Pomorski, Pawel & Karttunen, Mikko & Ying, See-Chen & Bhattacharya, Aniket. 2008. Dynamical scaling exponents for polymer translocation through a nanopore. Physical Review E. Volume 78, Issue 5. P. 050901/1-4. ISSN 1539-3755 (printed). DOI: 10.1103/physreve.78.050901.