Generalised deep-learning workflow for the prediction of hydration layers over surfaces

dc.contributorAalto-yliopistofi
dc.contributorAalto Universityen
dc.contributor.authorRanawat, Yashasvi S.en_US
dc.contributor.authorJaques, Ygor M.en_US
dc.contributor.authorFoster, Adam S.en_US
dc.contributor.departmentDepartment of Applied Physicsen
dc.contributor.groupauthorSurfaces and Interfaces at the Nanoscaleen
dc.date.accessioned2022-11-09T07:58:52Z
dc.date.available2022-11-09T07:58:52Z
dc.date.issued2022-10-01en_US
dc.descriptionFunding Information: This work was supported by World Premier International Research Center Initiative (WPI), MEXT, Japan and by the Academy of Finland (project No. 314862). Publisher Copyright: © 2022 The Author(s)
dc.description.abstractAtomic force microscopy (AFM) is paving the way for understanding the solid–liquid interfaces at the nanoscale. These AFM studies are complemented with molecular dynamics (MD) simulations of hydration layers over candidate surfaces for a comprehensive characterisation. We earlier proposed, in Ranawat et.al. (2021), a deep-learning (DL) network to predict hydration layers over the candidate surfaces much more rapidly than computationally-intensive MD. However, the proposed elements-as-channels based network is bound to the elements present in the training surfaces. Here, we develop a generalised descriptor of the surface to train element-agnostic networks. We demonstrate the descriptor's efficacy by predicting the hydration layers over a dolomite surface using a network trained on the calcite and magnesite surfaces. We also demonstrate the transfer-learning capability of such a descriptor by incorporating mica into the training surfaces, and predict the pyrophyllite and boehmite surfaces. Further, we propose an energy-based DL framework to gauge the possible prediction accuracy of a network on surfaces hitherto unseen. We combine these advance techniques into a generalised workflow to complement AFM studies.en
dc.description.versionPeer revieweden
dc.format.extent7
dc.format.mimetypeapplication/pdfen_US
dc.identifier.citationRanawat, Y S, Jaques, Y M & Foster, A S 2022, 'Generalised deep-learning workflow for the prediction of hydration layers over surfaces', Journal of Molecular Liquids, vol. 367, 120571, pp. 1-7. https://doi.org/10.1016/j.molliq.2022.120571en
dc.identifier.doi10.1016/j.molliq.2022.120571en_US
dc.identifier.issn0167-7322
dc.identifier.issn1873-3166
dc.identifier.otherPURE UUID: 0e894efe-f4cc-42ba-8318-3e2896235a4ben_US
dc.identifier.otherPURE ITEMURL: https://research.aalto.fi/en/publications/0e894efe-f4cc-42ba-8318-3e2896235a4ben_US
dc.identifier.otherPURE FILEURL: https://research.aalto.fi/files/90693273/Generalised_deep_learning_workflow_for_the_prediction_of_hydration_layers_over_surfaces.pdf
dc.identifier.urihttps://aaltodoc.aalto.fi/handle/123456789/117607
dc.identifier.urnURN:NBN:fi:aalto-202211096378
dc.language.isoenen
dc.publisherElsevier
dc.relation.fundinginfoThis work was supported by World Premier International Research Center Initiative (WPI), MEXT, Japan and by the Academy of Finland (project No. 314862).
dc.relation.ispartofseriesJournal of Molecular Liquidsen
dc.relation.ispartofseriesVolume 367, pp. 1-7en
dc.rightsopenAccessen
dc.subject.keywordCalciteen_US
dc.subject.keywordDeep learningen_US
dc.subject.keywordHydration layersen_US
dc.subject.keywordMicaen_US
dc.subject.keywordTransfer learningen_US
dc.subject.keywordWorkflowen_US
dc.titleGeneralised deep-learning workflow for the prediction of hydration layers over surfacesen
dc.typeA1 Alkuperäisartikkeli tieteellisessä aikakauslehdessäfi
dc.type.versionpublishedVersion

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
Generalised_deep_learning_workflow_for_the_prediction_of_hydration_layers_over_surfaces.pdf
Size:
2.68 MB
Format:
Adobe Portable Document Format