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Browsing by Author "Zhu, Shanfeng"

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Title: AiProAnnotator Author(s): Gao, Junning; Yao, Shuwei; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2018 Series: Proceedings of the 2018 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)
Title: BERTMeSH Author(s): You, Ronghui; Liu, Yuxuan; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2021-03-01 Series: Bioinformatics, Volume 37, issue 5
Title: DeepGraphGO Author(s): You, Ronghui; Yao, Shuwei; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2021-07-01 Series: Bioinformatics, Volume 37
Title: DeepMeSH Author(s): Peng, Shengwen; You, Ronghui; Wang, Hongning; Zhai, Chengxiang; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2016-06-15 Series: BIOINFORMATICS, Volume 32, issue 12
Title: DeepMHCII: a novel binding core-aware deep interaction model for accurate MHC-II peptide binding affinity prediction Author(s): You, Ronghui; Qu, Wei; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2022-06-24 Series: Bioinformatics (Oxford, England), Volume 38, issue 1
Title: DrugE-Rank Author(s): Yuan, Qingjun; Gao, Junning; Wu, Dongliang; Zhang, Shihua; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2016-06-15 Series: BIOINFORMATICS, Volume 32, issue 12
Title: HPOAnnotator Author(s): Gao, Junning; Liu, Lizhi; Yao, Shuwei; Huang, Xiaodi; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2019-12-23 Series: BMC Medical Genomics, Volume 12
Title: HPODNets: deep graph convolutional networks for predicting human protein–phenotype associations Author(s): Liu, Lizhi; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2022-02-01 Series: Bioinformatics, Volume 38, issue 3
Title: HPOFiller: identifying missing protein–phenotype associations by graph convolutional network Author(s): Liu, Lizhi; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2021-09-15 Series: Bioinformatics, Volume 37, issue 19
Title: HPOLabeler Author(s): Liu, Lizhi; Huang, Xiaodi; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2020-07-15 Series: Bioinformatics (Oxford, England), Volume 36, issue 14
Title: NetGO Author(s): You, Ronghui; Yao, Shuwei; Xiong, Yi; Huang, Xiaodi; Sun, Fengzhu; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2019-07-02 Series: Nucleic Acids Research, Volume 47, issue W1
Title: A Robust Convex Formulation for Ensemble Clustering Author(s): Gao, Junning; Yamada, Makoto; Kaski, Samuel; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2016-07 Series: Proceedings of the Twenty-Fifth International Joint Conference on Artificial Intelligence (IJCAI-16)
Title: Sc2Mol: a scaffold-based two-step molecule generator with variational autoencoder and transformer Author(s): Liao, Zhirui; Xie, Lei; Mamitsuka, Hiroshi; Zhu, Shanfeng Date: 2023-01-01 Series: Bioinformatics (Oxford, England), Volume 39, issue 1