Browsing by Author "Lees, John A."

Now showing items 1-4 of 4

Title: Genome-wide epistasis and co-selection study using mutual information Author(s): Pensar, Johan; Puranen, Santeri; Arnold, Brian; MacAlasdair, Neil; Kuronen, Juri; Tonkin-Hill, Gerry; Pesonen, Maiju; Xu, Yingying; Sipola, Aleksi; Sánchez-Busó, Leonor; Lees, John A.; Chewapreecha, Claire; Bentley, Stephen D.; Harris, Simon R.; Parkhill, Julian; Croucher, Nicholas J.; Corander, Jukka Date: 2019-10-10 Series: Nucleic Acids Research, Volume 47, issue 18
Title: Mandrake: visualizing microbial population structure by embedding millions of genomes into a low-dimensional representation Author(s): Lees, John A.; Tonkin-Hill, Gerry; Yang, Zhirong; Corander, Jukka Date: 2022-10-10 Series: Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Volume 377, issue 1861
Title: Sequence element enrichment analysis to determine the genetic basis of bacterial phenotypes Author(s): Lees, John A.; Vehkala, Minna; Välimäki, Niko; Harris, Simon R.; Chewapreecha, Claire; Croucher, Nicholas J.; Marttinen, Pekka; Davies, Mark R.; Steer, Andrew C.; Tong, Steven Y C; Honkela, Antti; Parkhill, Julian; Bentley, Stephen D.; Corander, Jukka Date: 2016-09-16 Series: NATURE COMMUNICATIONS, Volume 7
Title: SuperDCA for genome-wide epistasis analysis Author(s): Puranen, Santeri; Pesonen, Maiju; Pensar, Johan; Xu, Yingying; Lees, John A.; Bentley, Stephen; Croucher, Nicholas J; Corander, Jukka Date: 2018-05-29 Series: Microbial Genomics, Volume 4, issue 6