Browsing by Author "Corander, Jukka"

Title: ARK: Aggregation of Reads by K-Means for Estimation of Bacterial Community Composition Author(s): Koslicki, David; Chatterjee, Saikat; Shahrivar, Damon; Walker, Alan; Francis, Suzanna; Fraser, Louise; Vehkaperä, Mikko; Lan, Yueheng; Corander, Jukka Date: 2015 Series: PloS one, Volume 10, issue 10

Title: Bayesian inference of atomistic structure in functional materials Author(s): Todorović, Milica; Gutmann, Michael U.; Corander, Jukka; Rinke, Patrick Date: 2019-03-18 Series: npj Computational Materials, Volume 5, issue 1

Title: Bayesian optimization for likelihood-free inference of simulator-based statistical models Author(s): Gutmann, Michael U.; Corander, Jukka Date: 2016-08-01 Series: Journal of Machine Learning Research, Volume 17

Title: Crowdsourced assessment of common genetic contribution to predicting anti-TNF treatment response in rheumatoid arthritis Author(s): Sieberts, Solveig K.; Zhu, Fan; García-García, Javier; Stahl, Eli; Pratap, Abhishek; Pandey, Gaurav; Pappas, Dimitrios; Aguilar, Daniel; Anton, Bernat; Bonet, Jaume; Eksi, Ridvan; Fornés, Oriol; Guney, Emre; Li, Hongdong; Marín, Manuel Alejandro; Panwar, Bharat; Planas-Iglesias, Joan; Poglayen, Daniel; Cui, Jing; Falcao, Andre O.; Suver, Christine; Hoff, Bruce; Balagurusamy, Venkat S K; Dillenberger, Donna; Neto, Elias Chaibub; Norman, Thea; Aittokallio, Tero; Ammad-Ud-Din, Muhammad; Azencott, Chloe Agathe; Bellón, Víctor; Boeva, Valentina; Bunte, Kerstin; Chheda, Himanshu; Cheng, Lu; Corander, Jukka; Dumontier, Michel; Goldenberg, Anna; Gopalacharyulu, Peddinti; Hajiloo, Mohsen; Hidru, Daniel; Jaiswal, Alok; Kaski, Samuel; Khalfaoui, Beyrem; Khan, Suleiman Ali; Kramer, Eric R.; Marttinen, Pekka; Mezlini, Aziz M.; Molparia, Bhuvan; Pirinen, Matti; Saarela, Janna; Samwald, Matthias; Stoven, Véronique; Tang, Hao; Tang, Jing; Torkamani, Ali; Vert, Jean Phillipe; Wang, Bo; Wang, Tao; Wennerberg, Krister; Wineinger, Nathan E.; Xiao, Guanghua; Xie, Yang; Yeung, Rae; Zhan, Xiaowei; Zhao, Cheng; Greenberg, Jeff; Kremer, Joel; Michaud, Kaleb; Barton, Anne; Coenen, Marieke; Mariette, Xavier; Miceli, Corinne; Shadick, Nancy; Weinblatt, Michael; De Vries, Niek; Tak, Paul P.; Gerlag, Danielle; Huizinga, Tom W J; Kurreeman, Fina; Allaart, Cornelia F.; Louis Bridges, S.; Criswell, Lindsey; Moreland, Larry; Klareskog, Lars; Saevarsdottir, Saedis; Padyukov, Leonid; Gregersen, Peter K.; Friend, Stephen; Plenge, Robert; Stolovitzky, Gustavo; Oliva, Baldo; Guan, Yuanfang; Mangravite, Lara M. Date: 2016-08-23 Series: NATURE COMMUNICATIONS, Volume 7

Title: Doubly Stochastic Neighbor Embedding on Spheres Author(s): Lu, Yao; Corander, Jukka; Yang, Zhirong Date: 2019-12-01 Series: Pattern Recognition Letters, Volume 128

Title: Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations Author(s): Mostowy, Rafal; Croucher, Nicholas J.; Andam, Cheryl P.; Corander, Jukka; Hanage, William P; Marttinen, Pekka Date: 2017-05-01 Series: MOLECULAR BIOLOGY AND EVOLUTION, Volume 34, issue 5

Title: ELFI: Engine for likelihood-free inference Author(s): Lintusaari, Jarno; Vuollekoski, Henri; Kangasrääsiö, Antti; Skytén, Kusti; Järvenpää, Marko; Marttinen, Pekka; Gutmann, Michael U.; Vehtari, Aki; Corander, Jukka; Kaski, Samuel Date: 2018-08-01 Series: JOURNAL OF MACHINE LEARNING RESEARCH, Volume 19

Title: Fundamentals and Recent Developments in Approximate Bayesian Computation Author(s): Lintusaari, Jarno; Gutmann, Michael; Dutta, Ritabrata; Kaski, Samuel; Corander, Jukka Date: 2016 Series: SYSTEMATIC BIOLOGY, Volume 66, issue 1

Title: Genome-wide epistasis and co-selection study using mutual information Author(s): Pensar, Johan; Puranen, Santeri; Arnold, Brian; MacAlasdair, Neil; Kuronen, Juri; Tonkin-Hill, Gerry; Pesonen, Maiju; Xu, Yingying; Sipola, Aleksi; Sánchez-Busó, Leonor; Lees, John A.; Chewapreecha, Claire; Bentley, Stephen D.; Harris, Simon R.; Parkhill, Julian; Croucher, Nicholas J.; Corander, Jukka Date: 2019-10-10 Series: Nucleic Acids Research, Volume 47, issue 18

Title: Genomic rearrangements uncovered by genome-wide co-evolution analysis of a major nosocomial pathogen, Enterococcus faecium Author(s): Top, Janetta; Arredondo-Alonso, Sergio; Schürch, Anita C.; Puranen, Santeri; Pesonen, Maiju; Pensar, Johan; Willems, Rob J.L.; Corander, Jukka Date: 2020-12-01 Series: Microbial Genomics, Volume 6, issue 12

Title: High-dimensional structure learning of sparse vector autoregressive models using fractional marginal pseudo-likelihood Author(s): Suotsalo, Kimmo; Xu, Yingying; Corander, Jukka; Pensar, Johan Date: 2021-11 Series: STATISTICS AND COMPUTING, Volume 31, issue 6

Title: Identification of multiplicatively acting modulatory mutational signatures in cancer Author(s): Kičiatovas, Dovydas; Guo, Qingli; Kailas, Miika; Pesonen, Henri; Corander, Jukka; Kaski, Samuel; Pitkänen, Esa; Mustonen, Ville Date: 2022-12 Series: BMC Bioinformatics, Volume 23, issue 1

Title: Inferring Cognitive Models from Data using Approximate Bayesian Computation Author(s): Kangasrääsiö, Antti; Athukorala, Kumaripaba; Howes, Andrew; Corander, Jukka; Kaski, Samuel; Oulasvirta, Antti Date: 2017-05-09 Series: Proceedings of the 2017 CHI Conference on Human Factors in Computing Systems

Title: Interacting networks of resistance, virulence and core machinery genes identified by genome-wide epistasis analysis Author(s): Skwark, Marcin J.; Croucher, Nicholas J.; Puranen, Santeri; Chewapreecha, Claire; Pesonen, Maiju; Xu, Yingying; Turner, Paul; Harris, Simon R.; Beres, Stephen B.; Musser, James M.; Parkhill, Julian; Bentley, Stephen D.; Aurell, Erik; Corander, Jukka Date: 2017-02-01 Series: PLOS GENETICS, Volume 13, issue 2

Title: Inverse finite-size scaling for high-dimensional significance analysis Author(s): Xu, Yingying; Puranen, Santeri; Corander, Jukka; Kabashima, Yoshiyuki Date: 2018-06-06 Series: Physical Review E, Volume 97, issue 6

Title: Learning discrete decomposable graphical models via constraint optimization Author(s): Janhunen, Tomi; Gebser, Martin; Rintanen, Jussi; Nyman, Henrik; Pensar, Johan; Corander, Jukka Date: 2017 Series: STATISTICS AND COMPUTING, Volume 27, issue 1

Title: Likelihood-free inference by ratio estimation Author(s): Thomas, Owen M.; Dutta, Ritabrata; Corander, Jukka; Kaski, Samuel; Gutmann, Michael Date: 2022-03 Series: Bayesian Analysis, Volume 2021

Title: Likelihood-free inference via classification Author(s): Gutmann, Michael U.; Dutta, Ritabrata; Kaski, Samuel; Corander, Jukka Date: 2018 Series: STATISTICS AND COMPUTING

Title: Likelihood-Free Inference with Deep Gaussian Processes Author(s): Aushev, Alexander; Pesonen, Henri; Heinonen, Markus; Corander, Jukka; Kaski, Samuel Date: 2022-10 Series: Computational Statistics & Data Analysis, Volume 174

Title: Low-rank doubly stochastic matrix decomposition for cluster analysis Author(s): Yang, Zhirong; Corander, Jukka; Oja, Erkki Date: 2016-10-01 Series: Journal of Machine Learning Research, Volume 17

Browsing by Author "Corander, Jukka"

Browsing by Author "Corander, Jukka"

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